The corpus consists of 1000 MEDLINE abstracts. It is a subset of the original GENIA POS & term corpus, which was selected using the three MeSH terms human, blood cells and transcription factors. In each sentence, three types of information are annotated 1) biomedical terms are identified and assi...

This is a workflow that is designed especially for use in the UIMA-based U-Compare workbench (see separate META-SHARE record). The workflow is in "ucz" format (specific to U-Compare) and can be imported via the "Import Workflow" item in the "Workflows" menu of the U-Compare interface. It include...

Web service created by exporting UIMA-based workflow from the U-Compare text mining system. Functionality: Performs discourse parsing on plain text. Also identifies sentences, tokens, parts of speech, lemmas, clauses and coreference chains Tools in workflow: UAIC-POSTagger, UAIC-NPChunker, UAI...

Web service created by exporting UIMA-based workflow from the U-Compare text mining system. Functionality: Identifies NP chunks in plain text. Also carries out sentence splitting, tokenisation and POS tagging Tools in workflow: MLRS Sentence Splitter (University of Malta), UAIC-POSTagger, UAIC-...

The GENIA tagger analyzes English sentences and outputs the base forms, part-of-speech tags, chunk tags, and named entity tags. The tagger is specifically tuned for biomedical text such as MEDLINE abstracts.