PhenoCHF Corpus

PhenoCHF is an annotated corpus consisting of documents belonging to two different text types (i.e., narrative reports from electronic health records (EHRs) and literature articles). It is manually annotated by medical doctors with detailed information relating to mentions of phenotype concepts a...

Resource Type:Corpus
Media Type:Text
Language:English
HIMERA Corpus

The HIMERA annotated corpus contains a set of published historical medical documents that have been manually annotated with semantic information that is relevant to the study of medical history and public health. Specifically, annotations correspond to seven different entity types and two differe...

Resource Type:Corpus
Media Type:Text
Language:English
A Terminological Inventory for Biodiversity

In order to construct the inventory, we firstly compiled a species name dictionary by combining all of the names available in Catalogue of Life (CoL), Encyclopedia of Life (EoL) and Global Biodiversity Information Facility (GBIF). The terms contained in this dictionary were then located within ...

Resource Type:Lexical / Conceptual
Media Type:Text
Language:English
U-Compare Platform

The purpose of the U-Compare platform is to facilitate easy and rapid development and evaluation of NLP and text mining systems. It includes utilities (including a graphical user interface, the U-Compare workbench, see separate record in META-SHARE) to create workflows from individual, interopera...

Resource Type:Tool / Service
UIMA/U-Compare STEPP Tagger

Part-of-speech tagger tuned to biomedical text. The tool is provided as a UIMA component, which forms part of the in-built library of components provided with the U-Compare platform (see separate META-SHARE record) for building and evaluating text mining workflows. The U-Compare Workbench (se...

Resource Type:Tool / Service
Language:English
U-Compare NP Chunking Service

Web service created by exporting UIMA-based workflow from the U-Compare text mining system. Functionality: Identifies NP chunks in plain text. Also carries out sentence splitting, tokenisation and POS tagging Tools in workflow: MLRS Sentence Splitter (University of Malta), UAIC-POSTagger, UAIC-...

Resource Type:Tool / Service
Language:Romanian
U-Compare Apertium Part-of-Speech Tagging Workflow

This is a workflow that is designed especially for use in the UIMA-based U-Compare workbench (see separate META-SHARE record). The workflow is in "ucz" format (specific to U-Compare) and can be imported via the "Import Workflow" item in the "Workflows" menu of the U-Compare interface. It include...

Resource Type:Tool / Service
Languages:Basque
Catalan; Valencian
English
Galician
Portuguese
Spanish; Castilian
U-Compare Workbench

The U-Compare Workbench is a graphical user interface that operates on top of the U-Compare platform. The U-Compare platform allows users to build and evaluate NLP workflows. Workflows consist of one or more components, consisting of corpus readers and tools, such as tokenisers, POS taggers, name...

Resource Type:Tool / Service
GENIA Tagger

The GENIA tagger analyzes English sentences and outputs the base forms, part-of-speech tags, chunk tags, and named entity tags. The tagger is specifically tuned for biomedical text such as MEDLINE abstracts.

Resource Type:Tool / Service
Language:English
U-Compare Part-of-Speech Tagging service

Web service created by exporting UIMA-based workflow from the U-Compare text mining system. Functionality: Identifies tokens in plain text and assigns parts-of-speech Tools in workflow: MLRS POS Tagger web service (University of Malta) NOTE: The licence provided covers the web service only. To...

Resource Type:Tool / Service
Language:Maltese