The GENIA tagger analyzes English sentences and outputs the base forms, part-of-speech tags, chunk tags, and named entity tags. The tagger is specifically tuned for biomedical text such as MEDLINE abstracts. The tool is provided as a UIMA component, which forms part of the in-built library of...
PhenoCHF is an annotated corpus consisting of documents belonging to two different text types (i.e., narrative reports from electronic health records (EHRs) and literature articles). It is manually annotated by medical doctors with detailed information relating to mentions of phenotype concepts a...
The GENIA tagger analyzes English sentences and outputs the base forms, part-of-speech tags, chunk tags, and named entity tags. The tagger is specifically tuned for biomedical text such as MEDLINE abstracts.
The U-Compare Workbench is a graphical user interface that operates on top of the U-Compare platform. The U-Compare platform allows users to build and evaluate NLP workflows. Workflows consist of one or more components, consisting of corpus readers and tools, such as tokenisers, POS taggers, name...
In order to construct the inventory, we firstly compiled a species name dictionary by combining all of the names available in Catalogue of Life (CoL), Encyclopedia of Life (EoL) and Global Biodiversity Information Facility (GBIF). The terms contained in this dictionary were then located within ...
Treat is a toolkit for natural language processing and computational linguistics in Ruby. The Treat project aims to build a language- and algorithm- agnostic NLP framework for Ruby with support for tasks such as document retrieval, text chunking, segmentation and tokenization, natural language pa...