Web service created by exporting UIMA-based workflow from the U-Compare text mining system. Functionality: Identifies tokens in plain text and assigns parts-of-speech Tools in workflow: MLRS POS Tagger web service (University of Malta) NOTE: The licence provided covers the web service only. To...
Web service created by exporting UIMA-based workflow from the U-Compare text mining system. Functionality: Identifies and categorises syntactic chunks in plain text Tools in workflow: Freeling shallow parser web service (service provided by the PANACEA project) NOTE: The licence provided cove...
Web service created by exporting UIMA-based workflow from the U-Compare text mining system. Functionality: Identifies sentences and tokens in plain text. Parts of speech and lemmas are assigned to tokens. Language is automatically identified amongst the supported languages and language-specific ...
The purpose of the tool is to detect sentence boundaries in English text. It is trained on the GENIA corpus of biomedical abstracts and so is particularly suitable for splitting sentences in biomedical texts. The tool is provided as a UIMA component, which forms part of the in-built library of co...
Part-of-speech tagger tuned to biomedical text, provided as a web service.
Web service created by exporting UIMA-based workflow from the U-Compare text mining system. Functionality: Identifies paragraphs in plain text Tools in workflow: MLRS Paragraph Splitter (University of Malta) NOTE: The licence provided covers the web service only. Tools used to create the workf...
Web service created by exporting UIMA-based workflow from the U-Compare text mining system. Functionality: Identifies biomedical named entities (genes and proteins) in plain text. Also identifies sentences. Tools in workflow: Cafetiere Sentence Splitter (University of Manchester), NEMine (Univ...
Web service created by exporting UIMA-based workflow from the U-Compare text mining system. Functionality: Identifies biological named entities and disambiguates them according to species, by assigning a species ID from the NCBI taxonomy. Also identifies sentences and tokens. Tools in workflow...
The purpose of the tool is to identify gene and protein names in biomedical text. The tool is provided as a UIMA component, which forms part of the in-built library of components provided with the U-Compare platform for building and evaluating text mining workflows. The U-Compare Workbench pr...
The GENIA tagger analyzes English sentences and outputs the base forms, part-of-speech tags, chunk tags, and named entity tags. The tagger is specifically tuned for biomedical text such as MEDLINE abstracts. The tool is provided as a UIMA component, which forms part of the in-built library of...