Tokenisation is one of the functionalities of the GENIA tagger, which additionally outputs the base forms, part-of-speech tags, chunk tags, and named entity tags. The tagger is specifically tuned for biomedical text such as MEDLINE abstracts. The tool is a UIMA component, which forms part of th...

The purpose of the tool is to detect sentence boundaries in English text. It is trained on the GENIA corpus of biomedical abstracts and so is particularly suitable for splitting sentences in biomedical texts. The tool is provided as a UIMA component, which forms part of the in-built library of co...

The purpose of the U-Compare platform is to facilitate easy and rapid development and evaluation of NLP and text mining systems. It includes utilities (including a graphical user interface, the U-Compare workbench, see separate record in META-SHARE) to create workflows from individual, interopera...

The GENIA tagger analyzes English sentences and outputs the base forms, part-of-speech tags, chunk tags, and named entity tags. The tagger is specifically tuned for biomedical text such as MEDLINE abstracts. The tool is provided as a UIMA component, which forms part of the in-built library of...

This is a UIMA wrapper for the OpenNLP Sentence Detector tool. It splits English text into individual sentences. The tool forms part of the in-built library of components provided with the U-Compare platform (see separate META-SHARE record) for building and evaluating text mining workflows. ...

Web service created by exporting UIMA-based workflow from the U-Compare text mining system. Functionality: Identifies and categorises syntactic chunks in plain text Tools in workflow: Freeling shallow parser web service (service provided by the PANACEA project) NOTE: The licence provided cove...

Part-of-speech tagger tuned to biomedical text, provided as a web service.

Syntactic parser for English. Outputs dependency relations. Also outputs parts-of-speech for each token. The tool is provided as a UIMA component, specifically as Java archive (jar) file, which can be incorporated within any UIMA workflow. However, it is particularly designed use in the U-Com...

Web service created by exporting UIMA-based workflow from the U-Compare text mining system. Functionality: Identifies biological named entities and disambiguates them according to species, by assigning a species ID from the NCBI taxonomy. Also identifies sentences and tokens. Tools in workflow...

The U-Compare Workbench is a graphical user interface that operates on top of the U-Compare platform. The U-Compare platform allows users to build and evaluate NLP workflows. Workflows consist of one or more components, consisting of corpus readers and tools, such as tokenisers, POS taggers, name...